Publications In progress

https://www.msf.lu.se/publications - 2025-04-03

For the most recent publications from the MR Physics Group, see: Recent Publications For all publications 1994 - 2019 as per the webpage date, please see the links below : Papers   Reviews   Books, Book Chapters, Proceeding Chapters     Correspondence and Editorials          Popular Science      Theses   MR PHYSICS GROUP PUBLICATION STATISTICS 1994-2019             New Thesis Emelie Lind March 1 2

https://www.msf.lu.se/research/mr-physics-group/publications - 2025-04-03

The list is made in alphabetic order (first author) for every year. Group members are indicated in bold and links are provided for publications during the last three years.. 2017-2020 2007-2016 1994-2006  

https://www.msf.lu.se/research/mr-physics-group/publications/papers - 2025-04-03

2019 In Press Zhou J, Heo HY, Knutsson L, van Zijl PCM, Jiang S.APT-weighted MRI: Techniques, current neuro applications, and challenging issues.J Magn Reson Imaging. 2019 Jan 20. doi: 10.1002/jmri.26645. [Epub ahead of print] Review.2019 Alexander DC, Dyrby TB, Nilsson M, Zhang H.Imaging brain microstructure with diffusion MRI: practicality and applications.NMR Biomed. 2019 Apr;32(4):e3841. 2018

https://www.msf.lu.se/research/mr-physics-group/publications/reviews - 2025-04-03

2018 Ahlgren A, Wirestam R:Flow Compensated IVIM in the Ballistic Regime: Data Acquisition, Modeling and Brain Applications. In: Intravoxel Incoherent Motion (IVIM) MRI: Principles and Applications. Pan Stanford Publishing Pte Ltd (2018) Print ISBN: 9789814800198. 2017 Björkman-Burtscher I, Markenroth Bloch K, Sundgren PM:Detailed anatomy at 7T: Cerebrum. In: Neuroimaging: Anatomy meets function,

https://www.msf.lu.se/research/mr-physics-group/publications/books-book-chapters-proceeding-chapters - 2025-04-03

2012 Geleijns J, Breatnach E, Cantera AC, Damilakis J, Dendy P, Evans A, Faulkner K, Padovani R, Van Der Putten W, Schad L, Wirestam R, Eudaldo T; on behalf of the European Federation of Organisations for Medical Physics (EFOMP) and the European Society of Radiology (ESR). Core curriculum for medical physicists in radiology. Recommendations from an EFOMP/ESR working group. Insights Imaging. 2012 J

https://www.msf.lu.se/research/mr-physics-group/publications/correspondence-and-editorials - 2025-04-03

2018 Knutsson L, Sundgren PC:Clinical utility of Amide Proton Transfer imaging in patients with brain tumors. MAGNETOM Flash (71) 2/2018:52-55. Markenroth Bloch K, Björkman-Burtscher I, Ståhlberg F: (In Swedish).Den nationella 7T anläggningen – en uppdatering.ImagoMedica, Svensk förening för Medicinsk Radiologi, Medlemsforum nr 2 2018: 11-13. Stahlberg F p 7,73; Markenroth Bloch K p 73,77; Nilsson

https://www.msf.lu.se/research/mr-physics-group/publications/popular-science - 2025-04-03

Theses including publications with MR physics group member(s) as authors/co-authors 2019 Lind E:MRI Perfusion Measurements using Magnetic Susceptibility Effects:Calibration Approaches and Contrast Agent Quantification.Department of Medical Radiation Physics, Lund University, March 2019. 2018 Bibic A:Wavelet noise reduction and vascular water transport modelling: Applications to diffusion and perfu

https://www.msf.lu.se/research/mr-physics-group/publications/theses - 2025-04-03

The MR Physics group is divided into several research environments or subgroups. The subgroup structure is dynamic and the number of subgroups as well as the research topics therefore varies over time. Subgroups, forming a “vertical” organisation structure in the group, are always encouraged to collaborate, thereby forming “horizontal/translational" collaborative structures, often defined by parti

https://www.msf.lu.se/research/mr-physics-group/research-environments - 2025-04-03

Undrar du hur man kombinerar sitt intresse för fysik och matematik med biologi och medicin? Vill du ha ett omväxlande och spännande yrke, där fysik och olika strålningstillämpningar möter biologi och medicin, med människan i centrum? I så fall kan sjukhusfysikerutbildningen vara rätt för dig. Som legitimerad sjukhusfysiker blir du expert på strålningsfysik och strålskydd. Inom hälso- och sjukvårde

https://www.msf.lu.se/sjukhusfysikerutbildning - 2025-04-03

MATLAB code for Multidimensional Diffusion MRI This package contains MATLAB files to help researchers analyze multi-dimensional diffusion MRI data, for example, data acquired withb-tensors of varying shape. https://github.com/markus-nilsson/md-dmri   MRI simulator in MATLAB A simple MRI simulator for visualization of various concepts https://github.com/markus-nilsson/mri-simulator   The MR IDL lib

https://www.msf.lu.se/research/mr-physics-group/software - 2025-04-03

Overview Features two classes for image display (single image and matrix of images) to be combined with plugins for grey/color-scale change, zooming and panning plugin for ROI definition and evaluation plugin for patient data overlay from DICOM data display and ROI classes create mouse/image change/palette change events handling of image sets via dedicated classes writing of DICOM3.0 format and di

https://www.msf.lu.se/research/mr-physics-group/software/mr-idl-library - 2025-04-03

LUPE is a modular software for calculation of brain perfusion parametric maps from dynamic susceptibility contrast perfusion weighted MR images.   Source code and a runtime version (.sav file) are published here under the terms of the GPL. See the overview below for more info. Overview   News: Latest version is 1.2. See the modules page for changes and additions. Included is now a 11-page user gui

https://www.msf.lu.se/research/mr-physics-group/software/lupe-lund-perfusion-program - 2025-04-03

As described, all program functionality is realized in separated modules. Inter-module communication is accomplished exclusively via a central container holding all image sets.The current version (1.2) encompasses the modules listed below. A couple of more experimental modules as a.o. CT -perfusion, image registration, and some code for ASL analysis are available upon request.Loading of a perfusio

https://www.msf.lu.se/research/mr-physics-group/software/lupe-lund-perfusion-program/modules - 2025-04-03

The latest program version is 1.2 Download (zip 2.8 MB)   Lupe 1.2 is based on version 2.3 of the Lund IDL library. The zip file for download contains both, Lupe and the library against which it has been compiled and tested. Newer versions of the library might work, older versions will most likely not as program and library development go hand in hand. Important: By downloading and using the progr

https://www.msf.lu.se/research/mr-physics-group/software/lupe-lund-perfusion-program/download - 2025-04-03

BackgroundChemical Exchange Saturation Transfer (CEST) MRI is a new technology that can detect low (millimolar) concentrations of natural non-metallic magnetic marker molecules through the presence of groups with exchangeable protons, such as hydroxyls (OH), amides (NH) and amines (NH2). These protons interact with the water protons detected in MRI through physical exchange, generally referred to

https://www.msf.lu.se/research/mr-physics-group/research-environments/cest - 2025-04-03

BackgroundIn diffusion MRI (dMRI), images are sensitised to water diffusion by the application of magnetic field gradients. Cell membranes hinder the diffusional motion and thereby contribute to the contrast in dMRI. Thus, the diffusion of water molecules is used a probe of tissue microstructure. Specific WorkData from dMRI is often analysed using diffusion tensor imaging (DTI), which yields image

https://www.msf.lu.se/research/mr-physics-group/research-environments/microstructure-imaging-diffusion-mri - 2025-04-03

BackgroundFunctional MRI (fMRI) is a non-invasive technique for the study of brain function that utilizes changes in blood flow and volume accompanying brain activation. When neuronal activation occurs, local blood flow increases, leading to an increase in oxygenated blood. The different magnetic properties of oxygenated and deoxygenated blood yields signal changes in the MRI images. This effect i

https://www.msf.lu.se/research/mr-physics-group/research-environments/fmri - 2025-04-03

BackgroundPerfusion MRI typically refers to MRI-based measurements of microcirculatory parameters such as blood flow, blood volume and blood mean transit time. Imaging of perfusion-related parameters is of relevance in, for example, studies of dementia and trauma, assessment of the ischemic penumbra in acute ischemic stroke (in combination with diffusion MRI) to facilitate treatment decisions, inv

https://www.msf.lu.se/research/mr-physics-group/research-environments/perfusion - 2025-04-03

Background and AimWe develop and implement magnetic resonance imaging (MRI) methods for evaluation and diagnosis of musculoskeletal disease. Specifically, we focus on studies of early stage osteoarthritis (OA) which is the most common chronic condition of the joints. It is characterized by breakdown of joint cartilage but the whole joint is involved in the development of the disease. For example,

https://www.msf.lu.se/research/mr-physics-group/research-environments/qmsk-musculoskeletal-mri - 2025-04-03